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Publications

Peer-reviewed journal publications and conference proceedings

2024

  • L. Li, E. Alsema, N. Beijer, B. Gumuscu, "Magnetically-Driven Hydrogel Surfaces for Modulating Macrophage Behavior", ACS Biomaterials Science & Engineering, 2024, doi: 10.1021/acsbiomaterials.4c01624. [PDF]

  • B. Gumuscu, L. Li, K.J. Bakal, O.M.J.A. Stassen, H.M. Wyss, J. Lazendic-Galloway, "Integrating Challenge-Based Learning in a Vertical Classroom: A Cross-Disciplinary Approach to Teaching Microfluidics for Biomedical Engineering and Mechanical Engineering Students", SEFI 2024, Vol. 1, No. 1, 2024, pp. 53-74, ISSN 3006-6301. [PDF]

  • A.C. Manjua, B. Gumuscu, "Exploring the impact of electromagnetic stimulation on cardiovascular micromodels", International Conference on Miniaturized Systems for Chemistry and Life Sciences, μTAS 2024.
  • M. Ozden, B. Gumuscu, "Optimized dielectric stack for improving the performance of 3D digital microfluidic platforms in cell culturing", International Conference on Miniaturized Systems for Chemistry and Life Sciences, μTAS 2024.
  • M. Khorsand, B. Gumuscu, "Ion sensing in digital microfluidics for cell microenvironment monitoring", International Conference on Miniaturized Systems for Chemistry and Life Sciences, μTAS 2024.

2023

  • D.C. ‘t Hart, D. Yildiz, V. Palacio-Castañeda, L. Li, B. Gumuscu, R. Brock, W.P.R. Verdurmen, J. van der Vlag, T. Nijenhuis, "Co-Culture of Glomerular Endothelial Cells and Podocytes in a Custom-Designed Glomerulus-on-a-Chip Model Improves the Filtration Barrier Integrity and Affects the Glomerular Cell Phenotype", Biosensors, 2023, 13, 339. [PDF]

  • A.C. Manjua, J.M.S. Cabral, F.C. Ferreira, J.G.E. Gardeniers, C.A.M. Portugal, B. Gumuscu, "Design of blood vessel models using magnetic-responsive vascular platforms", Adv. Mater. Technol., 2023, doi: 10.1002/admt.202300617. [PDF]

  • O.K. Savchak, B. Gumuscu, "Enabling long-term liquid handling in digital microfluidics platforms for cell culture settings." International Conference on Miniaturized Systems for Chemistry and Life Sciences, μTAS 2023.

  • M. Ozden, B. Gumuscu, "Development of a 3D fabricated digital microfluidic platform with high-content screening." International Conference on Miniaturized Systems for Chemistry and Life Sciences, μTAS 2023.

2022

  • L. Li, B. Gumuscu, "Magnetically-actuated dynamic surfaces for regulating immune response", Netherlands Society for Biomaterials and Tissue Engineering (NBTE) Annual Conference, Lunteren, Netherlands, 1-2 December 2022.

  • L. Li, B. Gumuscu, "Magnetically-actuated dynamic surfaces (MadSurface) for regulating immune response", NanoBioTech Montreux, Montreux, 14-16 November 2022. 

  • A.C. Manjua,  J.M.S. Cabral, F.C. Ferreira, C.A.M. Portugal, H.J.G. Gardeniers, B. Gumuscu, "Magnetic blood vessel devices as vascularization models", 26th International Conference on Miniaturized Systems for Chemistry and Life Sciences (MicroTAS), Hangzhou, China, 23-27 October 2022.

  • S. Veretennikov, K. Minartz, V. Menkovski, B. Gumuscu, J. de Boer, “Simulation of scientific experiments with generative models”, IDA 2022 Conference on Intelligent Data Analysis, Rennes, France, 20-22 April 2022.

2021

  • A. Traina, J.G.E. Gardeniers, B. Gumuscu, “Self-powered microfluidic device for the colorimetric detection of lithium via sequential reagent mixing”, Research on Engineering Structures & Materials, 2021, 7, 347-360. [PDF]

  • B. Gumuscu, S.M. Grist, J.V. Vlassakis, C.C. Kang, A.E. Herr, “Tissue projection electrophoretic separation of protein”, U.S.A. patent, WO 212974. [PDF]

2020

  • A. Traina, J.G.E. Gardeniers, B. Gumuscu, Finger-driven pump assisted microfluidic platform for colorimetric detection of lithium, 23rd International Conference on Miniaturized Systems for Chemistry and Life Sciences (MicroTAS), Online, 4-9 October 2020.

  • B. Gumuscu, A.E. Herr, “Single-cell immunoblotting in hydrogel microparticles”, Lab on a Chip, 2020, 20, 64-73. [PDF]

2019

  • A.M. Benneker, B. Gumuscu, E.G.H. Derckx, R.G.H. Lammertink, J.C.T. Eijkel, J.A. Wood, Electrokinetic enhancement of ion transport through changing membrane topology”, 13th International Symposium on Electrokinetics (ELKIN), Cambridge, Massachusetts, USA, 12-14 June 2019.

2018

  • B. Gumuscu, J.C.T. Eijkel, “Capillary Pinning Assisted Patterning of Hydrogel Microarray Microchips” in “Cell-based microarrays: methods and protocols”, ISSN: 1064-3745, Ed.s Peter Ertl and Mario Rothbauer, Humana Press. [PDF]

  • A.M. Benneker, B. Gumuscu, E. G.H. Derckx, R.G.H. Lammertink, J.C.T. Eijkel, J.A. Wood, “Efficient determination of geometric effects on ion transport through charge selective materials”, Lab on a Chip, 2018, 18, 1652-1660[PDF]

  • B. Gumuscu, A.E. Herr, “Free-floating protein barcode microstructures for single-cell western blotting”, U.S.A. pre-patent, BK-BK-2018-125. [PDF]

2017

  • B. Gumuscu, H.J. Albers, A. van den Berg, J.C.T. Eijkel, A.D. van der Meer, “Multicompartmental Hydrogel Arrays for Controlled Microfluidic 3D Tissue Cultures”, Scientific Reports, 2017, 7, 3381. [PDF]

  • B. Gumuscu, J.G. Bomer, H.L. de Boer, A. van den Berg, J.C.T. Eijkel, “Exploiting biased reptation for continuous flow preparative DNA fractionation”, Nature Microsystems and Nanoengineering, 2017, 3, 17001. [PDF]

2016

  • B. Gumuscu, A.S. Haase, A.M. Benneker, M.A. Hempenius, A. van den Berg, R.G.H. Lammertink, J.C.T. Eijkel, “Desalination by electrodialysis using a stack of patterned ion-selective hydrogels on a microfluidic device”, Advanced Functional Materials, 2016, 26, 8685-8693. [PDF]

  • B. Gumuscu, A. van den Berg, J.C.T. Eijkel, “Continuous flow DNA fractionation based on field-dependent mobility in Agarose Gels”, Chiranal 2016, Olomouc, Czech Republic (invited talk).

2015

  • B. Gumuscu, J.G. Bomer, A. van den Berg, J.C.T. Eijkel, “Photopatterning of hydrogel microarrays in closed microchips”, Biomacromolecules, 2015, 16, 3802-3810. [PDF]

  • B. Gumuscu, J.G. Bomer, A. van den Berg, J.C.T. Eijkel, “Large scale patterning of hydrogel microarrays using capillary pinning”, Lab on a Chip, 2015,15, 664-667. [PDF]

  • B. Gumuscu, D. Cekmecelioglu and T. Tekinay, “Complete dissipation of 2,4,6-trinitrotoluene by in-vessel composting”, RSC Advances, 2015, 5, 51812-51819. [PDF]

2014

  • B. Gumuscu, Z. Erdogan, M. O. Guler and T. Tekinay, “A highly sensitive determination of trinitrotoluene and its metabolites by using diol functionalized column with high performance liquid chromatography”, PloS One, 2014, 9, 6, e99230. [PDF]

2012

  • B. Gumuscu, T. Tekinay, “Effective biodegradation of 2, 4, 6 – trinitrotoluene using a novel bacterial strain isolated from TNT – contaminated soil”, International Biodeterioration & Biodegradation, 2012, 85, 35 – 41. [PDF]

  • T. Tekinay, B. Gumuscu, “Isolation of novel bacteria strains providing degradation of 2,4,6-trinitrotoluene”, Turkish patent, 2012-O-111830. [PDF]

2011

  • B. Gumuscu, T. Tekinay, “TNT degradation by novel bacteria strains”, Current Opinion in Biotechnology, 2011, 22:S66. [PDF]